Insertion junction: CLIP2.048412_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048412
Chromosome:chromosome 11
Location:542172
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467599 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCCAGTGCGTGAAGCACCTTCTGAAGTAAGGCGGGTTAGCCTGGGG
Internal bar code:CATATCTCGAGACCTAGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCCCTTTACCCAGCAG
Suggested primer 2:GACCCCTACTGCATCATCCG