Insertion junction: CLIP2.048412_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048412
Chromosome:chromosome 17
Location:3953773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728200 (1 of 1) K11664 - vacuolar protein sorting-associated protein 72 (VPS72, TCFL1, YL1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGGAGGTAGGGATTGAGTAGCGGGGATTTGTTTGGGCCCTGAGTTG
Internal bar code:TAAGTGAGTGCTCGTGATGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGATCGGTGCACATCTA
Suggested primer 2:GGGTTTTTGTGACGCCACTC