Insertion junction: CLIP2.048414_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048414
Chromosome:chromosome 3
Location:6000432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189605 (1 of 1) K15176 - RNA polymerase-associated protein CTR9 (CTR9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCTGGGGGCGAGGTCGGGTTACGCACCGGGACCCAGCCCGCAGCCGC
Internal bar code:GGATGTCGGTAGGGTGCGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1446
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCTCTCTCTCTGGGCCC
Suggested primer 2:GTGCGTGTGTAATTGAGGGC