Insertion junction: CLIP2.048417_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048417
Chromosome:chromosome 16
Location:731500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGTGTGGCGATCTGTGTGCCCCACTGTCCCTGTCTCGCGCAGGCGG
Internal bar code:AGTTATTAAATTTGTGTCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACGCAACTGTCAATGC
Suggested primer 2:CTTCCAGATCGCGCAAAGC