Insertion junction: CLIP2.048417_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048417
Chromosome:chromosome 16
Location:731513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATAGCCAGTTATGTATGGCACCTACCGCGGCCATGCCATGTGCCATA
Internal bar code:AGTTATTAAATTTGTGTCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:851
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCAGATCGCGCAAAGC
Suggested primer 2:TGACACGCAACTGTCAATGC