Insertion junction: CLIP2.048418_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048418
Chromosome:chromosome 3
Location:2986408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163200 (1 of 1) K15683 - NF-X1-type zinc finger protein NFXL1 (NFXL1, OZFP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGATCGCAGCGGCCGTGTGTGACTGTACGGCAGCAGCAGCAGCAGCTT
Internal bar code:CATGGAGATGGTACTTGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2246
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACGTGAACAGGCTACAA
Suggested primer 2:AAGGTGCAGGTGAGAAAGGG