Insertion junction: CLIP2.048421_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048421
Chromosome:chromosome 12
Location:3029779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGCATGGCCAAGGAGCTGGGCCCTGAGGGCCGCTCGGCGCGCACAG
Internal bar code:CCTACATTTTCGGTAAGGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1241
LEAP-Seq percent confirming:67.5
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGGTTTCCAGCAACTAT
Suggested primer 2:TCGGTCAAAGTCTGCAACGA