Insertion junction: CLIP2.048422_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048422
Chromosome:chromosome 2
Location:367301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075550 (1 of 1) PTHR28532//PTHR28532:SF1 - FAMILY NOT NAMED // ORAL CANCER-OVEREXPRESSED PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACTTAGCGGATTGGGTTTCCGCGCGCCGCGAGCCTGGGTGCCACTC
Internal bar code:GTTTTCATCGATCAGGCCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTATGCTGGCTGTGTCCG
Suggested primer 2:AACTCCATAAGCCACTGCCC