Insertion junction: CLIP2.048423_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048423
Chromosome:chromosome 17
Location:4575871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731850 SDR29 Short-chain dehydrogenase/reductase; (1 of 1) 1.3.1.34 - 2,4-dienoyl-CoA reductase (NADPH) / 4-enoyl-CoA reductase (NADPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATATATGTGTGCAAAATATGTGGGTGACAGCGCGGCAGTTGCGGAAA
Internal bar code:TAGCGCGGTGTAAAGGATTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3531
LEAP-Seq percent confirming:85.2941
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTTTGCTTCTGCTTCAA
Suggested primer 2:CGACAGCCTACTCAGCTAGC