Insertion junction: CLIP2.048428_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048428
Chromosome:chromosome 7
Location:2265824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327687 (1 of 1) PF06080 - Protein of unknown function (DUF938) (DUF938) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGCTGCATCCAACCGCCACCCCACCCCCAGGGCCAGAAGCGCGAGA
Internal bar code:GTCGTGCCGATTGCGAATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1091
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGTGTGGCCGATTGAA
Suggested primer 2:AGCATCGTTGTGTGTAGCCA