Insertion junction: CLIP2.048439_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048439
Chromosome:chromosome 12
Location:9180746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCTGGCGTGCCGGCACCCGCGTCCACGCGGCCTGCTGGCAGTCCGGC
Internal bar code:GGGCCAACTACATTCGAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5099
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGATGGGGCAACAAGG
Suggested primer 2:CGCAGAAGTCGACAGGATCA