Insertion junction: CLIP2.048446_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048446
Chromosome:chromosome 12
Location:2953555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502251 (1 of 1) PTHR31065:SF4 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACACCGCGCCGCCAGCGGCCCCCTGACCAAGCAGCAACAACACGCA
Internal bar code:CACGGGTATATATGAACTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2367
LEAP-Seq percent confirming:54.2857
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGTGTGTTGAGATGAGG
Suggested primer 2:ATGCTGCTAACACAGGCTGT