Insertion junction: CLIP2.048447_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048447
Chromosome:chromosome 4
Location:3420983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800491 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAACCTAGACCACCTTTTGACCCTCCAGCGCAACCCCCCTGCCATTCC
Internal bar code:AATGGCAATGTGCTAGAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2619
LEAP-Seq percent confirming:68.4615
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGTCACCTGTTGTCCAG
Suggested primer 2:CTGCTATTGTGCGCGTGTAC