Insertion junction: CLIP2.048447_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048447
Chromosome:chromosome 4
Location:3420987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800491 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTGCCCTGCGGCGTTGTAGGTCAGCGTAGTGCAAGTATATTGCGATT
Internal bar code:AATGGCAATGTGCTAGAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1290
LEAP-Seq percent confirming:77.4194
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTATTGTGCGCGTGTAC
Suggested primer 2:GGGAGTCACCTGTTGTCCAG