Insertion junction: CLIP2.048453_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048453
Chromosome:chromosome 10
Location:1232061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426350 predicted protein; (1 of 2) 5.2.1.14 - Beta-carotene isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGACACGCCCCTGAGATGCTACCCTGAGATCCACGCCAAGCCACGC
Internal bar code:CTGGTAGTAGTCCACAAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCACGTCGTTGACCTTG
Suggested primer 2:GCTGTCAGCGCGATGTTAAG