Insertion junction: CLIP2.048454_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048454
Chromosome:chromosome 7
Location:1511348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324200 BTA1 (1 of 1) K13621 - betaine lipid synthase (BTA1); Diacylglyceryl-N,N%252CN-trimethylhomoserine synthesis protein 3'UTR
Cre07.g800777 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAGACTCCTGCGGCCTCAGCCTCATTCTGTGCGTCCATGCAAGCGC
Internal bar code:GTCGCAGACGTAATCTTTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1469
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAATCGCGCAGTTGGATG
Suggested primer 2:GTACTCGTCTGGTGTGCACA