Insertion junction: CLIP2.048458_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048458
Chromosome:chromosome 3
Location:5803782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTCCGCCAGGTAATTATGCGGCTCGTCCTCGCCGGCGCCGCCGCCAC
Internal bar code:TGGATCTGTTGGGCCGGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCATGAAAACCCTAGCT
Suggested primer 2:CAACTCATTGGTGCGTGCAA