Insertion junction: CLIP2.048458_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048458
Chromosome:chromosome 13
Location:4054611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCGCTCGGTCTTGTGGACTTGGCTTGTAACGGAATTCCGAATGCT
Internal bar code:ACTCAAAATTACGCTATTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3912
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCAGGGCTGTAATGCAT
Suggested primer 2:GGAAGGTCACAAGAGCCTCC