Insertion junction: CLIP2.048467_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048467
Chromosome:chromosome 7
Location:2971499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333050 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase intron
lncRNA_TCONS_00072854 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACGTCCACGGCTCCTCGTGGCTTGTGTTCCTCGCTGCTCGATGCCCC
Internal bar code:CTCCTCGGTTCGTGTGGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2655
LEAP-Seq percent confirming:91.7808
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCGTTGTTTGCGGAAAG
Suggested primer 2:CGACCTGTCTGTCACATGCT