Insertion junction: CLIP2.048472_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048472
Chromosome:chromosome 9
Location:6408765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414750 ELG33 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 33 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCCCGTGCTTACCCGGACTTGTCGCGTGCACGCTGGGAGCAAAGTT
Internal bar code:AACCGGAGTGTGTGAGGACTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4953
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAATGCCAAAACAGCAC
Suggested primer 2:GGAGTGTTCTGTCTGCACGA