Insertion junction: CLIP2.048483_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048483
Chromosome:chromosome 12
Location:6008511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534350 HCD2 (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD; 3-hydroxyacyl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTCTCTGGGCATTCCTCCACAGGCACCTGAACCTCACGATGATGCCC
Internal bar code:CGGTGTAGCCTCGGTCGAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1452
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGTCCTCTGACATCCTA
Suggested primer 2:GACGAGGTAGACATGAGGCG