Insertion junction: CLIP2.048483_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048483
Chromosome:chromosome 12
Location:6008512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534350 HCD2 (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD; 3-hydroxyacyl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACGGACACGGCAACAGCCGACAATGAGTACGGCAAGGGAGAGACG
Internal bar code:GTGAGGCAGCGAGGCGTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:5.12821
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAGGTAGACATGAGGCG
Suggested primer 2:TGCGGTCCTCTGACATCCTA