Insertion junction: CLIP2.048486_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048486
Chromosome:chromosome 3
Location:6764796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196600 RAD17 (1 of 1) PTHR12172//PTHR12172:SF0 - CELL CYCLE CHECKPOINT PROTEIN RAD17 // RAD17; presequence translocase-associated protein import motor subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGACGCTTCTCCAGGCTACAGGCTATGCGCGTCGCAATTTCAGTCCCA
Internal bar code:AAGTTTTTTTACACTTTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1194
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGGCAGAGCATACGCA
Suggested primer 2:AACCTCATGCACCCCTAACG