Insertion junction: CLIP2.048488_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048488
Chromosome:chromosome 1
Location:5232396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036650 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTTCGCGCAGGTGGGTGGACGTGCGCATGGGAGCTGCAGCACAGGGT
Internal bar code:TATTAATTAATGGTTGCATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4784
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCATCGTTCCAAATCTC
Suggested primer 2:TGGGTATGGAGGACCTGGAG