Insertion junction: CLIP2.048496_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048496
Chromosome:chromosome 3
Location:9000521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203345 (1 of 21) IPR001357 - BRCT domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGAACCCAAACTCCGGTCCCCACTCACCCCTGCTCCGCCCCCCGCCA
Internal bar code:ACGTATTGACATGGTAAAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTCATCTGTCGCACGC
Suggested primer 2:TGCAGGACTACGTGTTGCAT