Insertion junction: CLIP2.048505_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048505
Chromosome:chromosome 7
Location:5180004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348750 (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCCAAAAGCCCACACGCGCACCTGCTCAATGGCCAAACACGCCTGG
Internal bar code:GGGTTTCAGAAGTAGCAACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4938
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCGAAAAGATGGTGATC
Suggested primer 2:AACCGAATGTCCGCCAGAAT