Insertion junction: CLIP2.048510_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048510
Chromosome:chromosome 12
Location:5313958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528350 (1 of 1) IPR000408//IPR001810//IPR009091 - Regulator of chromosome condensation, RCC1 // F-box domain // Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTATGCGACGACGGCTTGGGTTGACCCTGCTTGTTTACTCGAATTGTC
Internal bar code:CGTTGACTGGTGAAGATGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:44.7368
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGGCATGGGTTGAAGAT
Suggested primer 2:GCATCTCGCTCGCTTTCAAG