Insertion junction: CLIP2.048511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048511
Chromosome:chromosome 10
Location:274579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419550 (1 of 1) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCCAATCGCCTCCCTCGGCGCCACCCCCGTCTTCCCCACCTCCGG
Internal bar code:AAACTGTCCAGTATTGCCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTATGCATGGTGCTTCG
Suggested primer 2:ACTGCAATCGACCAGACGTT