Insertion junction: CLIP2.048524_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048524
Chromosome:chromosome 16
Location:6067833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677800 (1 of 1) PTHR21530//PTHR21530:SF1 - PHEROMONE SHUTDOWN PROTEIN // TRAB FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCTCGCCATTATACGCAAGCCAAGCCACGTACGCGCCTGCGCCCAGC
Internal bar code:TTCGTTGTTAAATTCTGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTCCCAAACGAACCTA
Suggested primer 2:TGTGGGCTATCGGTTTGGTC