Insertion junction: CLIP2.048526_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048526
Chromosome:chromosome 9
Location:5395636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408250 EEF1A2 Eukaryotic translation elongation factor 1-alpha; (1 of 1) PTHR23115//PTHR23115:SF170 - TRANSLATION FACTOR // ELONGATION FACTOR 1-ALPHA 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCTGCCACTGCGCCGTCCTCCGCCTGCCACTCTTTATCCATTCCCCA
Internal bar code:GTTTTGGATACCGGCTGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:18.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTACACACACACACAC
Suggested primer 2:TTGTCTTCCTTCACTCCGGC