Insertion junction: CLIP2.048532_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048532
Chromosome:chromosome 3
Location:1189988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149400 RWP11 (1 of 1) IPR003035//IPR011989//IPR016181 - RWP-RK domain // Armadillo-like helical // Acyl-CoA N-acyltransferase; RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACAGCGGCCGGGGCGACGGCGGCGGCGGTGGCCACATGTATGCTTCTG
Internal bar code:TGCGTACGAAGATGTTTGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4180
LEAP-Seq percent confirming:98.6667
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTCTTGTATGCCGCAC
Suggested primer 2:ACCTGCCGAAAGAGGAACTG