Insertion junction: CLIP2.048537_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048537
Chromosome:chromosome 3
Location:3489020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167200 (1 of 1) PTHR23097//PTHR23097:SF107 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACAGCGGCGCGCTGCGGCAGCTGTACAACCTGGCGGTACAGCGTCAGC
Internal bar code:ATTCGAACGGAGTTAGCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATGACTGTGGAGTGCACCT
Suggested primer 2:ATGAGCCGGGGCATTGTTAA