Insertion junction: CLIP2.048541_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048541
Chromosome:chromosome 6
Location:2840757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272100 (1 of 1) K15463 - tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-] (RIT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGTTGCATCTACAAACCCAGGGACGCCCTGCACCCGCGGCATACGGG
Internal bar code:GTTACCCGGCGCGGTCGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1672
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACCACCATCATCGTCAC
Suggested primer 2:TGCCGAGTGATGTTGCTCTT