Insertion junction: CLIP2.048543_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048543
Chromosome:chromosome 14
Location:609887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611850 (1 of 1) K17087 - transmembrane 9 superfamily member 3 (TM9SF3) intron
lncRNA_TCONS_00189627 intron
lncRNA_TCONS_00191355 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCTTGACAACAATGCGGGCCCTTCCCTTTCCAAGGAAAGAGGGCCCC
Internal bar code:GAAATGAGGGGTTTGTGCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGTCGTACGTGTGAGA
Suggested primer 2:GGAGACCGCCAAGACAAAGA