Insertion junction: CLIP2.048546_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048546
Chromosome:chromosome 10
Location:4119807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448550 (1 of 3) PF14240 - YHYH protein (YHYH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTAGAGCTTGGGGTGGACGTCGGCCCAGTAGGCGCTGATGTCGCTGAC
Internal bar code:AGGTAGTTGTTAGGATTATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4203
LEAP-Seq percent confirming:57.8125
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAGCCCACACCAGTACC
Suggested primer 2:CCAACGGATCCTACATCCCG