Insertion junction: CLIP2.048555_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048555
Chromosome:chromosome 7
Location:5543297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351700 (1 of 1) PTHR19315:SF9 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTACGGCAGATGCACGATTAGCCCTTTACAATACACGTAAGGGACA
Internal bar code:TAGGTATATAACGTCGCCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAGCTCGACACCAGTCC
Suggested primer 2:ATACCCGACCGGAAGTCTCA