Insertion junction: CLIP2.048561_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048561
Chromosome:chromosome 8
Location:3620918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCGCACACCCTGCAGTCATGGCCATCAGCTCGGGCTGGGCGTCGGC
Internal bar code:CCCGGGCGTGTAAGGTTTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1153
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTTTGACACGCTGGTTG
Suggested primer 2:GAATCTGGATTTGCGCGGTC