Insertion junction: CLIP2.048568_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048568
Chromosome:chromosome 13
Location:2762542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582270 FFT3 putative fructan fructosyltransferase; (1 of 1) IPR001362//IPR013148//IPR023296 - Glycoside hydrolase, family 32 // Glycosyl hydrolase family 32, N-terminal // Glycosyl hydrolase, five-bladed beta-propellor domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGGCAAGGCGGTGGGTAACACGCCCGCTGCTGAGCGGGGGGGAGCGG
Internal bar code:CAGCTTTGGGTGTGTGGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2159
LEAP-Seq percent confirming:70.7692
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACGCGGTCATTAACTG
Suggested primer 2:AACACGTCGTTCCAGCTTCT