Insertion junction: CLIP2.048579_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048579
Chromosome:chromosome 3
Location:4645289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177007 (1 of 1) PTHR12480:SF6 - JMJC DOMAIN-CONTAINING PROTEIN 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTCGCCCGCTGGGTCTGAGGTTGTTATACGGGTAGTAATTACGCAAG
Internal bar code:GTGGTTCCTAGAATAGATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2057
LEAP-Seq percent confirming:91.9355
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGACCTGTACCACAT
Suggested primer 2:AGGAGGAGAAGAGGCAGGAG