Insertion junction: CLIP2.048579_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048579
Chromosome:chromosome 3
Location:4645295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177007 (1 of 1) PTHR12480:SF6 - JMJC DOMAIN-CONTAINING PROTEIN 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACCAGGCGGGCAGAAAACAAAAACAGCACACAAACCAAAACACGCAG
Internal bar code:CTAGTATTATAAGCGGGAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGAAGAGGCAGGAG
Suggested primer 2:GCAGCAGACCTGTACCACAT