Insertion junction: CLIP2.048589_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048589
Chromosome:chromosome 17
Location:2615491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802051 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGCGGCCTGCAGCCCTGCGACCTGCTGGCGGCGGTGGCGGTGCAGGG
Internal bar code:GAAGCTACGGCGTGGCAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1933
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAATGCGAACCCTGTGT
Suggested primer 2:TGTTGCCCGTAACTAACCCC