Insertion junction: CLIP2.048600_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048600
Chromosome:chromosome 2
Location:1505679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084150 (1 of 60) IPR001611 - Leucine-rich repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCCCGAAGATCGTGCCTGCGCCCATCACCGTGACGCTGCGCTGCAAC
Internal bar code:GGTCGGCGCCTAGCTGTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGAGGTGTGTGTCGAAG
Suggested primer 2:CCTCTAGGGGTGGAAGCGAT