Insertion junction: CLIP2.048610_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048610
Chromosome:chromosome 3
Location:7931989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCACACATGCTAGCATGGCAGAGGGCAATGGTGATCTAGGGCAAACA
Internal bar code:CCTCGTGAGGTCGTGGCTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2822
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGCTTCGAAACTTGTA
Suggested primer 2:CAGCGGCATTCATTGATGGG