Insertion junction: CLIP2.048611_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048611
Chromosome:chromosome 17
Location:6649728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745797 (1 of 40) IPR000182//IPR016181 - GNAT domain // Acyl-CoA N-acyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCCGGGCTCCCAGGGGTGCCCCTGCCCCGGACGGGCTCCGTGGTGT
Internal bar code:CCGCAGTTTCTAATACGCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2887
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGCCTAAGCGACGTGA
Suggested primer 2:ATCCTTGACTGAGGCTGCAC