Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | - |
Strain: | CLIP2.048614 |
Chromosome: | chromosome 3 |
Location: | 6130287 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre03.g800355 | (1 of 3) PF03732//PF13650 - Retrotransposon gag protein (Retrotrans_gag) // Aspartyl protease (Asp_protease_2) | CDS |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | ACACCGCGGCTATAGCTGATATCCGCGCGGATAGGGCCCAGGAAGCTGTT |
Internal bar code: | GGGAAGGTTGCCGATGACCAGA |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1032 |
LEAP-Seq percent confirming: | 31.25 |
LEAP-Seq n confirming: | 15 |
LEAP-Seq n nonconfirming: | 33 |
LEAP-Seq n unique pos: | 48 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | GACAGACCCCGAGCTTCAAA |
Suggested primer 2: | TATGCACGCCCTTGTGGAAT |