Insertion junction: CLIP2.048619_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048619
Chromosome:chromosome 3
Location:4441492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800331 intron
lncRNA_TCONS_00070774 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGAGGTCGAGGGCGCCGCACCTGGTTTAGCGGCAGCCGTGCACGGT
Internal bar code:CAAATAGGGAGCCCTGCTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGCGGTGTGTAACTGG
Suggested primer 2:AGCAATGCTTGACGACTCCA