Insertion junction: CLIP2.048636_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048636
Chromosome:chromosome 11
Location:215487
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467555 (1 of 1) PF00023//PF13857 - Ankyrin repeat (Ank) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCCCGCCCGCCTGCCGCCTGCCTCACCTCGTCCTGCGCGCAGCAGT
Internal bar code:AATACAATCTCTAGTTTAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGCATCGCTAACCAAG
Suggested primer 2:AAGGAGGAGGAGGATGGCAT