Insertion junction: CLIP2.048641_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048641
Chromosome:chromosome 12
Location:8969545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545300 (1 of 2) PTHR21514//PTHR21514:SF0 - UNCHARACTERIZED // AP-4 COMPLEX ACCESSORY SUBUNIT TEPSIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACCAGAACCAGAATCAGAACCAGCCCTAAGCCAGTACACATTATGGGA
Internal bar code:AGAGTGTTGAGTCACTGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTCTGTCCCCCGGATTT
Suggested primer 2:GAACAAGTCGTCTAGGGGCG