Insertion junction: CLIP2.048656_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048656
Chromosome:chromosome 3
Location:4492970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175750 (1 of 1) PTHR12461:SF2 - JMJC DOMAIN-CONTAINING PROTEIN 7 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTGTCTACGGCCCTGGGCCTGGCGGAGGAGCCGCCCGCGCTGGAGA
Internal bar code:CGGGGAACAATCGGATCGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACCCACCATCTTCCGT
Suggested primer 2:TACCTGCCGTCCATCTGGTA