Insertion junction: CLIP2.048658_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048658
Chromosome:chromosome 12
Location:5689862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532050 (1 of 1) PF00069//PF04564//PF07714//PF12796 - Protein kinase domain (Pkinase) // U-box domain (U-box) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTCTGACCCCATAGTGCGGGAGCTCATGGCGCGGGGCGCCCGCCATG
Internal bar code:TTCTTGGGCTAATAGATAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGGGGTGCTTCTGTACT
Suggested primer 2:TTGGTGCTATCTCGCTAGCG